論文・総説

原著論文

     
  1. Kano, F., Noguchi, Y., Murata, M. (2017) Establishment and phenotyping of disease model cells created by cell-resealing technique. Sci. Rep. 7, Article number: 15167. doi:10.1038/s41598-017-15443-0

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  2. Yamaoki, Y., Kiyoishi, A., Miyake, M., Kano, F., Murata, M., Nagata T., Katahira, M. (2017) The first successful observation of in-cell NMR signals of DNA and RNA in living human cells. Phys. Chem. Chem. Phys. doi:10.1039/C7CP05188C

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  3. Horiuchi, Y., Nakatsu, D., Kano, F., Murata, M. (2017) Pyruvate kinase M1 interacts with A-Raf and inhibits endoplasmic reticulum stress-induced apoptosis by activating MEK1/ERK pathway in mouse insulinoma cells. Cell. Signal. 38 : 212–222. doi: 10.1016/j.cellsig.2017.07.017.

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  4. Yoshizawa, R., Umeki, N., Yanagawa, M., Murata, M., Sako, Y. (2017) Single-molecule fluorescence imaging of RalGDS on cell surfaces during signal transduction from Ras to Ral. Biophys. Physicobiol. 14 : 75-84. doi: 10.2142/biophysico.14.0_75.

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  5. Taguchi, Y., Horiuchi, Y., Kano, F., Murata, M. (2017) Novel prosurvival function of Yip1A in human cervical cancer cells: constitutive activation of the IRE1 and PERK pathways of the unfolded protein response. Cell Death and Disease. 8, e2718. doi:10.1038/cddis.2017.147.

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  6. Matsuto, M., Kano, F., Murata, M. (2015) Reconstitution of the targeting of Rab6A to the Golgi apparatus in semi-intact HeLa cells: A role of BICD2 in stabilizing Rab6A on Golgi membranes and a concerted role of Rab6A/BICD2 interactions in Golgi-to-ER retrograde transport. Biochimica et Biophysica Acta (BBA) - Molecular Cell Research. 1853 (10): 2592–2609. doi:10.1016/j.bbamcr.2015.05.005.

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  7. Taguchi, Y., Imaoka, K., Kataoka, M., Uda, A., Nakatsu, D., Horii-Okazaki, S., Kunishige, R., Kano, F., Murata, M. (2015) Yip1A, a Novel Host Factor for the Activation of the IRE1 Pathway of the Unfolded Protein Response during Brucella infection. PLOS Pathogens. doi: 10.1371/journal.ppat.1004747 .

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  8. Arai, T., Kano, F., Murata, M. (2015) Translocation of forkhead box O1 to the nuclear periphery induces histone modifications that regulate transcriptional repression of PCK1 in HepG2 cells. Genes Cells. 20 (4): 340-357. doi: 10.1111/gtc.12226.

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  9. Nakatsu, D., Horiuchi, Y., Kano, F., Noguchi, Y., Sugawara, T., Takamoto, I., Kubota, N., Kadowaki, T., Murata, M. (2015) L-cysteine reversibly inhibits glucose-induced biphasic insulin secretion and ATP production by inactivating PKM2. Proc. Natl. Acad. Sci. USA. 112 (10): E1067-1076. doi: 10.1073/pnas.1417197112.

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  10. Sugawara, T., Kano, F., Murata, M. (2014) Rab2A is a pivotal switch protein that promotes either secretion or ER-associated degradation of (pro)insulin in insulin-secreting cells. Scientific Reports. 4. Article number: 6952. doi:10.1038/srep06952.

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  11. Nakatsu, D., Kano, F., Taguchi, Y., Sugawara, T., Nishizono, T., Nishikawa, K., Oda, Y., Furuse, M., Murata, M. (2014) JNK1/2-dependent phosphorylation of angulin-1/LSR is required for the exclusive localization of angulin-1/LSR and tricellulin at tricellular contacts in EpH4 epithelial sheet. Genes Cells. 19 (7): 565-581. doi: 10.1111/gtc.12158.

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  12. Fujiki, K., Shinoda, A., Kano, F., Sato, R., Shirahige, K., Murata, M. (2013) PPARγ-induced PARylation promotes local DNA demethylation by production of 5-hydroxymethylcytosine. Nature Communications. 4. Article number: 2262. doi:10.1038/ncomms3262.

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  13. Kano, F., Murata, M. (2013) The Semi-Intact Cell System and Methods for Cell Resealing: a Novel Systems Biology Tool to Elucidate Protein Networks with Spatio-Templioral Information. Advances in Systems Biology. 2(1): 6-14.
  14. Kano, F., Nakatsu, D., Noguchi, Y., Yamamoto, A., Murata, M. (2012) A Resealed-Cell System for Analyzing Pathogenic Intracellular Events: Perturbation of Endocytic Pathways under Diabetic Conditions. PLoS ONE. 7(8):e44127.

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  15. Murata, M., Kano, F. (2012) Hydrogen peroxide depletes phosphatidylinositol-3-phosphate from endosomes in a p38MAPK-dependent manner and perturbs endocytic transports and signal transduction in pathogenic cells. in Hydrogen Peroxide: Detection, Application and Health Implications. Nova Science Publishers.(Aguilar, G. and Guzman, R.A. ed.) Nova Publishers (ISBN 978-1-62257-415-5)

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  16. Murata, M., Kano, F. (2012) Semi-intact cell system: Application to the nalysis of membrane trafficking beween the endoplasmic reticulum and the Golgi apparatus and of cell cycle-dependent changes in the morphology of these organelles. in Crosstalk and Integration of Membrane Trafficking Pathways. (Weigert, R. ed.) INTECH (ISBN 978-953-51-0515-2)
  17. Sato, M.,Kitaguchi, T., Numano, R., Ikematsu, K., Kakeyama, M., Murata, M., Sato, K., Tsuboi, T. (2012) The small GTPase Cdc42 modulates the number of exocytosis-competent dense-core vesicles in PC12 cells. Biochem. Biophys. Res. Commun. 420(2):417-21.

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  18. Sugawara, T., Nakatsu, D., Kii, H., Maiya, N., Adachi, A., Yamamoto, A., Kano, F., Murata, M. (2012) PKCd and e regulate the morphological integrity of the ER-Golgi intermediate compartment (ERGIC) but not the anterograde and retrograde transports via the Golgi apparatus. Biochem. Biophys. Acta (Molecular Cell Research), 1823(4):861-875.

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  19. Sato, K., Tanabe, C.,Yonemura, Y., Watahiki, H., Zhao, Y., Yagishita, S., Ebina, M., Suo, S., Futai, U., Murata, M., Ishiura, S. (2011) Localization of mature Neprilysin in lipid rafts. J. Neurosci. Res. 90(4):870-877.

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  20. Kihara, T., Shinohara, S., Fujikawa, R., Sugimoto, Y., Murata, M,, Miyake, J. (2011) Regulation of cysteine-rich protein 2 localization by the development of actin fibers during smooth muscle cell differentiation. Biochem. Biophys. Res. Commun. 411:96-101.

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  21. Kano F, Arai T, Matsuto M, Hayashi H, Sato M, and Murata M. (2011). Hydrogen peroxide depletes phosphatidylinositol-3-phosphate from endosomes in a p38 MAPK-dependent manner and perturbs endocytosis. Biochim Biophys Acta. (Molecular Cell Research), 1813(5):784-801.

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  22. Adachi A, Kano F, Tsuboi T, Fujita M, Maeda Y, and Murata M. (2010). Golgi-associated GSK3beta retulates the sorting process of post-Golgi membrane trafficking. J. Cell Sci. 123(19):3215-3225.

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  23. Aoki, R., Inui, M., Hayashi, K., Sedohara, A., Okabayashi, K., Ohnuma, K., Murata, M. and Asashima, M. (2010) An In Vitro Reconstitution System for the Assessment of Chromatin Protein Fluidity during Xenopus Development.Biochem. Biophys. Res. Commun. 410:200-206.

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  24. Watanabe-Takahashi, M., Sato, T., Dohi, T., Noguchi, N., Kano, F., Murata, M., Hamabata, T., Natori, Y. and Nishikawa, K. (2010). An orally applicable Shiga toxin-neutralizer functions in the intestine to inhibit the intracellular transport of the toxin. Infect. Immun. 78(1):177-183.

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  25. Fujimura, K., Katahira, J., Kano, F., Yoneda, Y. and Murata, M. (2009). Microscopic dissection of the process of stress granule assembly. Biochem. Biophys. Acta (Molecular Cell Research), 1793(11):1728-1737.

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  26. Morikawa, R.K., Aoki, J. Tani, K., Tagaya, M., Kano, F., Murata, M., Yamamoto, A., Tsujimoto, M., Arai, H. (2009). Intracellular Phospholipase A1 iPLA1gamma is a Novel Factor Involved in COPI- and Rab6-Independent Retrograde Transport between the ER and the Golgi Complex. J. Biol. Chem. 284(39):26620-26630.

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  27. Fujiki, K., Kano, F., Shiota, K., and Murata, M. (2009). Expression of the PPARγ gene ts repressed by DNA methylation in visceral adipose tissue of mouse models of diabetes. BMC Biology, Jul 10;7(1):38.

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  28. Kano, F., Yamauchi, S., Yoshida, Y., Watanabe-Takahashi, M., Nishikawa, K., Nakamura, N., and Murata, M. (2009). Yip1A regulates the COPI-independent retrograde transport form the Golgi apparatus to the endoplasmic reticulum. J. Cell Sci. 122:2218-2227.

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  29. Fujimura, K., Katahira, J., Kano, F., Yoneda, Y., and Murata, M. (2009). Selective localization of PCBP2 to cytoplasmic processing bodies. Biochim. Biophys. Acta (Molecular Cell Research), 1793(5):878-887.

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  30. Adachi, A., Kano, F., Saido, T.C., and Murata M. (2009). Visual screening and analysis for kinase-regulated membrane trafficking pathways that are involved in extensive beta-amyloid secretion. Genes Cells. 14, 355-369.

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  31. Tanaka, A.R., Kano, F. ,Yamamoto, A., Ueda, K. and Murata, M. (2008) Formation of cholesterol-enriched structures by aberrant intracellular accumulation of ABCA1. Genes to Cells. 13(8):889-904.

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  32. Tanaka, A.R., Kano, F., Ueda, K. and Murata, M. (2008) The ABCA1 Q597R mutant undergoes trafficking from the ER upon ER stress. Biochem. Biophys. Res. Commun. 369:1174-1178.

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  33. Nakajima, H., Yonemura, S., Murata, M., Nakamura, N., Piwnica-Worms, H. and Nishida, E. (2008) Myt1 protein kinase is essential for Golgi and ER assembly during mitotic exit. J. Cell Biol. 181(1):89-103.

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  34. Fujimura, K., Kano, F. and Murata, M.(2008) Identification of PCBP2, a Facilitator of IRES-Mediated Translation, as a Novel Constituent of Stress Granule and Processing Body. RNA 14(3):425-431.

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  35. Fujimura, K., Kano, F. and Murata, M. (2008) Dual localization of the RNA binding protein CUGBP-1 to stress granule and perinuceolar compartment. Exp. Cell Res. 314(3):543-553.

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  36. Kihara, T., Kano, F. and Murata, M. (2008) Modulation of SRF-dependent gene expression by association of SPT16 with MKL1. Exp. Cell Res. 314:629-637.

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  37. Nonaka, M., Ma, B.Y., Ohtani, M., Yamamoto, A., Murata, M., Totani, K., Ito, Y., Miwa, K., Nogami, W., Kawasaki, N., and Kawasaki, T. (2007) Subcellular localization and physiological significance of intracellular mannan-binding protein. J. Biol. Chem.,282(24):17908-20.

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  38. Kano F, Kondo H, Yamamoto A, Kaneko Y, Uchiyama K, Hosokawa N, Nagata K, and Murata M. (2005) NSF/SNAPs and p97/p47/VCIP135 are sequentially required for cell cycle-dependent reformation of the ER network. Genes Cells: 10, 989-999.

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  39. Kano F, Kondo H, Yamamoto A, Tanaka AR, Hosokawa N, Nagata K, and Murata M. (2005) The maintenance of the endoplasmic reticulum network is regulated by p47, a cofactor of p97, through phosphorylation by cdc2 kinase. Genes Cells.: 10, 333-44.

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  40. Kano F, Tanaka AR, Yamauchi S, Kondo H, and Murata M. (2004) Cdc2 kinase-dependent disassembly of endoplasmic reticulum (ER) exit sites inhibits ER-to-Golgi vesicular transport during mitosis. Mol. Biol. Cell.: 15, 4289-4298.

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  41. Nadanaka S, Yoshida H, Kano F, Murata M, and Mori K. (2004) Activation of Mammalian Unfolded Protein Response Is Compatible with the Quality Control System Operating in the Endoplasmic Reticulum. Mol. Biol. Cell.: 15, 2537-2548.

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  42. Ichinose J, Murata M, Yanagida T, and Sako Y. (2004) EGF signalling amplification induced by dynamic clustering of EGFR. Biochem Biophys Res Commun.: 324, 1143-1149.

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  43. Uchiyama K, Jokitalo E, Lindman M, Jackman M, Kano F, Murata M, Zhang X, and Kondo H. (2003) The localization and phosphorylation of p47 are important for Golgi disassembly-assembly during the cell cycle. J. Cell Biol.: 161, 1067-1079.

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  44. Yuasa-Kawada J, Suzuki R, Kano F, Ohkawara T, Murata M, and Noda M. (2003) Axonal morphogenesis controlled by antagonistic roles of two CRMP subtypes in microtubule organization. Eur. J. Neurosci.: 17, 2329-2343.

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  45. Tanaka AR, Abe-Dohmae S, Ohnishi T, Aoki R, Morinaga G, Okuhira K, Ikeda Y, Kano F, Matsuo M, Kioka N, Amachi T, Murata M, Yokoyama S, and Ueda K. (2003) Effects of mutations of ABCA1 in the first extracellular domain on subcellular trafficking and ATP binding/ hydrolysis. J. Biol. Chem.: 278, 8815-8819.

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  46. Uchiyama K, Jokitalo E, Kano F, Murata M, Zhang X, Canas B, Newman R, Rabouille C, Pappin D, Freemont P, and Kondo H. (2002) VCIP135, a novel essential factor for p97/p47-mediated memrane fusion, is required for Golgi and ER assembly in vivo. J. Cell Biol.: 159, 855-866.

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  47. Kano F, Takenaka K, Yamamoto A, Nagayama K, Nishida E, and Murata M. (2000) MEK and Cdc2 kinase are sequentially required for Golgi disassembly in MDCK cells by the mitotic Xenopus extracts. J. Cell Biol.: 149, 357-368.

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  48. Kano F, Nagayama K, and Murata M. (2000) Reconstitution of the Golgi reassembly process in semi-intact MDCK cells. Biophys. Chem.: 84, 261-268.

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  49. Kano F, Sako Y, Tagaya M, Yanagida T, and Murata M. (2000) Reconstitution of brefeldin A-induced Golgi-tubulation and fusion with the ER in semi-intact CHO cells. Mol. Biol. Cell: 11, 3073-3087.

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総説

  1. 「ブルセラ・アボルタス菌の細胞内増殖を制御する新規宿主因子Yip1A」田口由起、加納ふみ、村田昌之:生化学、88巻1号、139-143. (2016)
  2. 「細胞内生命現象の再構成:病態モデル細胞構築への応用」加納ふみ、村田昌之:生体の科学、65巻5号、494-495. (2014)
  3. 「セミインタクト細胞リシール法を用いた細胞内イベントの可視化解析―「一細胞生物学」の細胞側ツールとして―」村田昌之、野口誉之、堀内雄太、堀井咲耶、加納ふみ:生物物理、Vol. 54 No.4, 206-209.(2014)

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  4. 「セミインタクト細胞リシール技術を用いた病態モデル細胞創成とその細胞工学的応用」加納ふみ、堀内雄太、野口誉之、村田昌之:細胞工学、Vol. 31 No.12,1376-1382. 秀潤社(2012)
  5. 「哺乳動物細胞ゴルジ体の細胞周期依存的ディスアッセンブリー」加納ふみ、村田昌之:生体の科学、63巻5号、404-407. (2012)
  6. 「新しい機能を問われ出した小胞体-ゴルジ体中間区画 (ER-Golgi intermediate compartment: ERGIC)」菅原太一、加納ふみ、村田昌之:生体の科学、63巻5号、424-425. (2012)
  7. 「セミインタクト細胞リシール法を用いた「病態モデル細胞」作製とその疾患研究への応用」村田昌之、加納ふみ:化学と生物、Vol.50(No.7) pp510-517. (2012)
  8. 「疾患解明とその基盤としてのエピジェネティクス」藤木克則、村田昌之:実験医学増刊「脂肪細胞機能とエピジェネティクス」、Vol.28 (No.15), pp176-182、羊土社 (2010)
  9. 「細胞染色のためのプローブ:小胞輸送ネットワーク内のオルガネラ・膜小胞」日原さえら、加納ふみ、村田昌之:蛍光・発光試薬トコトン活用法、pp90-94、羊土社(2007)
  10. 「細胞周期依存的なオルガネラ形態変化と細胞内小胞輸送のカップリング」加納ふみ、村田昌之:蛋白質・核酸・酵素、Vol.52 No.11, pp1344-1350、共立出版(2007)
  11. 「セミインタクト細胞を用いた細胞内ネットワークの可視化解析」加納ふみ、安達淳博、村田昌之:顕微鏡、42(2), 143-145.(2007)
  12. 「細胞を試験管とした生体分子の機能分析」村田昌之:「生命システムをどう理解するか」(浅島誠編集)、pp35-47、共立出版(2007)
  13. 「セミインタクト細胞を用いた細胞内イベントの可視化解析」山内忍、田中亜路、加納ふみ、村田昌之:生物物理、pp.153-156、45巻(2005)
  14. 「セミインタクト細胞アッセイ」村田昌之、木原隆典、加納ふみ:リポソーム応用の新展開 人工細胞の開発に向けて、pp.312-318、(2005)
  15. 「セミインタクト細胞アッセイ系の構築」加納ふみ,村田昌之:実験医学、Vol. 22 (No.16)、pp.2307-2311、羊土社(2004)
  16. 「セミインタクト細胞を用いた細胞内タンパク質の動態・機能の解析技術の開発」田中亜路、山内忍、加納ふみ、村田昌之:BIOINDUSTRY、Vol. 21(No.6)、 pp.28-35、シーエムシー出版(2004)
  17. 「蛋白質の一生の可視化」山内忍、村田昌之:蛋白質核酸酵素増刊「細胞における蛋白質の一生」、pp.933-934、共立出版(2004)
  18. 「GFP可視化技術を用いたオルガネラ動態観察」加納ふみ,村田昌之:実験医学別冊「培養細胞実験ハンドブック」(黒木敏雄,許南浩 編)pp.120-123、、羊土社(2004)
  19. 「細胞分裂時におけるオルガネラの分配則」村田昌之、加納ふみ:実験医学、Vol. 21 (No.18)、pp.2580-2581、羊土社(2003)
  20. 「哺乳動物細胞オルガネラの細胞周期依存的ダイナミクス」田中亜路、加納ふみ、村田昌之:生物物理、Vol. 241、pp.116-121、(2002)
  21. 「細胞内小胞輸送ネットワークの可視化解析」加納ふみ、田中亜路、村田昌之:実験医学、Vol. 20 (No.7)、pp.961-967、羊土社(2002)
  22. 「セミインタクト細胞を用いたタンパク質の細胞内ターゲティングとオルガネラバイオジェネシスの研究」加納ふみ、田中亜路、村田昌之:実験医学、Vol. 20、pp.961-967、羊土社(2002)
  23. 「セミインタクト細胞とGFPを用いたメンブレントラフィックの研究」村田昌之、加納ふみ:実験医学別冊「GFPとバイオイメージング」(宮脇敦史編)、pp.259-265、羊土社(2000)
  24. 「膜の動きを観て、操作する」加納ふみ、村田昌之:細胞工学、Vol. 19、No.7、pp.1023-1029、秀潤社 (2000)

著作

  1. "Riconstitution of Golgi disassembly by mitotic Xenopus egg extracts in semi-intact MDCK cells" Kano F, Takenaka K, and Murata M:"Xenopus protocol; methods in molecular biology (X. Johne Liu ed.)"、pp.357-365、Humana Press (2006)

    Details

  2. 「エンドサイトーシスの分子メカニズム」村田昌之、田中亜路:『よくわかる細胞内輸送』、pp.45-53、羊土社 (2002)
  3. 「細胞内小胞輸送ネットワークにおけるゴルジ体のダイナミクス」村田昌之、加納ふみ:シリーズ・ニューバイオフィジクスII 4巻『生体膜のダイナミクス』(八田一郎、村田昌之編)pp.119-138、共立出版 (2000)
  4. 「物質の取込みと消化」村田昌之:『現代医学の基礎 2巻』(石川春律、高井義美、月田承一郎編)、pp.163-188岩波書店 (2000)
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